Graph Attention Network-Based Detection of Autism Spectrum Disorder

TL;DR

This paper presents a novel graph attention network framework for early detection of Autism Spectrum Disorder using fMRI data, achieving high accuracy and identifying key brain regions.

Contribution

Introduces the GATGraphClassifier, a new attention-based graph convolutional network for ASD detection with improved accuracy and interpretability.

Findings

Achieved 88.79% accuracy on ASD detection

Surpassed existing methods by 12.27% in performance

Identified both known and novel brain regions associated with ASD

Abstract

Autism Spectrum Disorder (ASD) is a neurodevelopmental condition characterized by atypical brain connectivity. One of the crucial steps in addressing ASD is its early detection. This study introduces a novel computational framework that employs an Attention-Based Graph Convolutional Network, referred to as the GATGraphClassifier, for detecting ASD. We utilize Functional Magnetic Resonance Imaging (fMRI) data from the Autism Brain Imaging Data Exchange (ABIDE) repository to construct functional connectivity matrices using Pearson correlation, which captures interactions between various brain regions. These matrices are then transformed into graph representations, where the nodes and edges represent the brain regions and functional connections, respectively. The GATGraphClassifier employs attention mechanisms to identify critical connectivity patterns, thereby enhancing the model's interpretability and diagnostic accuracy. Our proposed framework demonstrates superior performance across all standard classification metrics compared to existing state-of-the-art methods. Notably, we achieved an average accuracy of 88.79\% on the test data over 30 independent runs, surpassing the benchmark model's performance by 12.27\%. In addition, we identified the crucial brain regions associated with ASD, consistent with the previous studies, and a few novel regions. This study not only contributes to the advancement of ASD detection but also shows the potential for broader adaptability of GATGraphClassifier in analyzing complex relational data in various fields, where understanding intricate connectivity and interaction patterns is essential.