Effective Resistance Rewiring: A Simple Topological Correction for Over-Squashing

TL;DR

This paper introduces Effective Resistance Rewiring (ERR), a global topology correction method for Graph Neural Networks that alleviates over-squashing by strengthening communication pathways through resistance-based edge adjustments.

Contribution

ERR is a simple, parameter-free rewiring strategy that uses effective resistance to improve message passing in GNNs, addressing global connectivity issues overlooked by local criteria.

Findings

ERR improves long-range information flow in GNNs.

Rewiring enhances predictive performance on various graph types.

Combining ERR with normalization stabilizes deep GNN training.

Abstract

Graph Neural Networks struggle to capture long-range dependencies due to over-squashing, where information from exponentially growing neighborhoods must pass through a small number of structural bottlenecks. While recent rewiring methods attempt to alleviate this limitation, many rely on local criteria such as curvature, which can overlook global connectivity constraints that restrict information flow. We introduce Effective Resistance Rewiring (ERR), a simple topology correction strategy that uses effective resistance as a global signal to detect structural bottlenecks. ERR iteratively adds edges between node pairs with the largest resistance while removing edges with minimal resistance, strengthening weak communication pathways while controlling graph densification under a fixed edge budget. The procedure is parameter-free beyond the rewiring budget and relies on a single global measure aggregating all paths between node pairs. Beyond predictive performance with GCN models, we analyze how rewiring affects message propagation. By tracking cosine similarity between node embeddings across layers, we examine how the relationship between initial node features and learned representations evolves during message passing, comparing graphs with and without rewiring. This analysis helps determine whether improvements arise from better long-range communication rather than changes in embedding geometry. Experiments on homophilic and heterophilic graphs, including directed settings with DirGCN, reveal a trade-off between over-squashing and oversmoothing, where oversmoothing corresponds to the loss of representation diversity across layers. Resistance-guided rewiring improves connectivity and signal propagation but can accelerate representation mixing in deep models. Combining ERR with normalization techniques such as PairNorm stabilizes this trade-off and improves performance.