Simultaneous separation in bounded degree trees
Sagi Snir, Raphael Yuster

TL;DR
This paper investigates the problem of finding single-edge cuts in multiple bounded-degree trees that maximize the minimum size of separated vertex sets, with applications to phylogenetics and new asymptotic bounds.
Contribution
It introduces the function f(r,k) for the maximum minimal split size in multiple trees and determines exact asymptotic values for specific cases, advancing understanding in phylogenetics.
Findings
f(r,2)=1/(2r) for two trees
f(3,3)=2/27 for three trees
Bounds are asymptotically tight in phylogenetics
Abstract
It follows from a classical result of Jordan that every tree with maximum degree at most containing a vertex set labeled by , has a single-edge cut which separates two subsets for which . Motivated by the tree dissimilarity problem in phylogenetics, we consider the case of separating vertex sets of {\em several} trees: Given trees with maximum degree at most , containing a common vertex set labeled by , we ask for a single-edge cut in each tree which maximizes where are separated by the corresponding cut at each tree. Denoting this maximum by and considering the limit (which is shown to always exist) we determine that and determine that , which is already quite intricate. The case…
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Taxonomy
TopicsGenome Rearrangement Algorithms · Genomics and Phylogenetic Studies · Advanced Combinatorial Mathematics
