Predicting Anemia Among Under-Five Children in Nepal Using Machine Learning and Deep Learning

TL;DR

This study applies machine learning and deep learning techniques to predict anemia in children under five in Nepal, identifying key risk factors and evaluating model performance for public health screening.

Contribution

It introduces a comprehensive feature selection process and compares multiple models, highlighting effective approaches for anemia prediction in resource-limited settings.

Findings

Logistic regression achieved highest recall (0.701)

DNN had the highest accuracy (0.709)

SVM showed best discrimination with AUC of 0.736

Abstract

Childhood anemia remains a major public health challenge in Nepal and is associated with impaired growth, cognition, and increased morbidity. Using World Health Organization hemoglobin thresholds, we defined anemia status for children aged 6-59 months and formulated a binary classification task by grouping all anemia severities as \emph{anemic} versus \emph{not anemic}. We analyzed Nepal Demographic and Health Survey (NDHS 2022) microdata comprising 1,855 children and initially considered 48 candidate features spanning demographic, socioeconomic, maternal, and child health characteristics. To obtain a stable and substantiated feature set, we applied four features selection techniques (Chi-square, mutual information, point-biserial correlation, and Boruta) and prioritized features supported by multi-method consensus. Five features: child age, recent fever, household size, maternal anemia, and parasite deworming were consistently selected by all methods, while amenorrhea, ethnicity indicators, and provinces were frequently retained. We then compared eight traditional machine learning classifiers (LR, KNN, DT, RF, XGBoost, SVM, NB, LDA) with two deep learning models (DNN and TabNet) using standard evaluation metrics, emphasizing F1-score and recall due to class imbalance. Among all models, logistic regression attained the best recall (0.701) and the highest F1-score (0.649), while DNN achieved the highest accuracy (0.709), and SVM yielded the strongest discrimination with the highest AUC (0.736). Overall, the results indicate that both machine learning and deep learning models can provide competitive anemia prediction and the interpretable features such as child age, infection proxy, maternal anemia, and deworming history are central for risk stratification and public health screening in Nepal.