Beyond Off-the-Shelf Models: A Lightweight and Accessible Machine Learning Pipeline for Ecologists Working with Image Data

TL;DR

This paper presents a user-friendly, lightweight machine learning pipeline that enables ecologists to classify images, such as wildlife camera trap photos, with high accuracy without requiring advanced ML expertise.

Contribution

The authors develop an accessible ML pipeline with a command-line and graphical interface, tailored for ecologists to create custom classifiers from limited ecological datasets.

Findings

Achieved 90.77% accuracy in age classification of red deer

Achieved 96.15% accuracy in sex classification of red deer

Demonstrated reliable demographic classification with limited data

Abstract

We introduce a lightweight experimentation pipeline designed to lower the barrier for applying machine learning (ML) methods for classifying images in ecological research. We enable ecologists to experiment with ML models independently, thus they can move beyond off-the-shelf models and generate insights tailored to local datasets and specific classification tasks and target variables. Our tool combines a simple command-line interface for preprocessing, training, and evaluation with a graphical interface for annotation, error analysis, and model comparison. This design enables ecologists to build and iterate on compact, task-specific classifiers without requiring advanced ML expertise. As a proof of concept, we apply the pipeline to classify red deer (Cervus elaphus) by age and sex from 3392 camera trap images collected in the Veldenstein Forest, Germany. Using 4352 cropped images containing individual deer labeled by experts, we trained and evaluated multiple backbone architectures with a wide variety of parameters and data augmentation strategies. Our best-performing models achieved 90.77% accuracy for age classification and 96.15% for sex classification. These results demonstrate that reliable demographic classification is feasible even with limited data to answer narrow, well-defined ecological problems. More broadly, the framework provides ecologists with an accessible tool for developing ML models tailored to specific research questions, paving the way for broader adoption of ML in wildlife monitoring and demographic analysis.