Exact fluctuation relation for open systems beyond the Zwanzig FEP equation
Mohammad Rahbar, Christopher J. Stein

TL;DR
This paper introduces a new fluctuation relation framework for open systems that accurately computes free energy differences beyond traditional methods, especially in complex, strongly coupled environments.
Contribution
It develops a trajectory-based fluctuation relation for open systems described by the Hamiltonian of mean force, extending beyond the Zwanzig FEP and including environment effects.
Findings
The new relations hold at the endpoint level and admit trajectory representations.
Validation shows improved accuracy over Zwanzig FEP in strongly coupled regimes.
The framework generalizes fluctuation relations to arbitrary dynamics and system-environment couplings.
Abstract
We develop a fluctuation framework to quantify the free energy difference between two equilibrium states connected by nonequilibrium processes under arbitrary dynamics and system-environment coupling. For an open system described by the Hamiltonian of mean force (HMF), we show that the equilibrium free energy difference between two canonical endpoints can be written as exponential averages of the HMF shift, divided by an explicit factor built from the chi-squared divergence between the initial and final system marginals. These relations hold at the endpoint level and, under an asymptotic equilibration postulate, admit trajectory representations for general driving and coupling protocols. A decomposition of the HMF increment along each trajectory separates the work-like contributions associated with changes in and , the heat-like exchange with the environment, and a…
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Taxonomy
TopicsAdvanced Thermodynamics and Statistical Mechanics · stochastic dynamics and bifurcation · Protein Structure and Dynamics
