Improved Interactive Protocol for Synchronizing From Deletions
Haolun (Michael) Ni, Lev Tauz, Ryan Gabrys, Lara Dolecek

TL;DR
This paper presents an enhanced data synchronization protocol that efficiently handles multiple deletions using advanced error correction codes, significantly reducing communication costs in distributed systems.
Contribution
It introduces a novel synchronization protocol integrating multi-deletion correction codes, improving upon previous single-deletion methods with better efficiency and generalized bounds.
Findings
Reduces communication cost compared to baseline protocols.
Outperforms previous methods in experimental tests.
Provides a generalized upper bound on transmitted bits.
Abstract
Data synchronization is a fundamental problem with applications in diverse fields such as cloud storage, genomics, and distributed systems. This paper addresses the challenge of synchronizing two files, one of which is a subsequence of the other and related through a constant rate of deletions, using an improved communication protocol. Building upon prior work, we integrate advanced multi-deletion correction codes into an existing baseline protocol, which previously relied on single-deletion correction. Our proposed protocol reduces communication cost by leveraging more general partitioning techniques as well as multi-deletion error correction. We derive a generalized upper bound on the expected number of transmitted bits, applicable to a broad class of deletion correction codes. Experimental results demonstrate that our approach outperforms the baseline in communication cost. These…
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Taxonomy
TopicsDNA and Biological Computing · Distributed systems and fault tolerance · Advanced Data Storage Technologies
