Hardness of Dynamic Tree Edit Distance and Friends

TL;DR

This paper demonstrates that for certain complex problems like Tree Edit Distance, Dyck Edit Distance, and RNA Folding, dynamic algorithms do not outperform static recomputation under common assumptions, highlighting fundamental computational limits.

Contribution

The paper proves that no efficient dynamic algorithms exist for these problems under standard conjectures, establishing a separation from string edit distance.

Findings

Dynamic algorithms for Tree, Dyck, and RNA Folding do not outperform static recomputation.

Quadratic lower bound for unweighted Tree Edit Distance under the $k$-Clique Conjecture.

First known separation between dynamic unweighted String and Tree Edit Distance.

Abstract

String Edit Distance is a more-than-classical problem whose behavior in the dynamic setting, where the strings are updated over time, is well studied. A single-character substitution, insertion, or deletion can be processed in time $\tilde{\mathcal{O}}(n w)$ when operation costs are positive integers bounded by $w$ [Charalampopoulos, Kociumaka, Mozes, CPM 2020][Gorbachev, Kociumaka, STOC 2025]. If the weights are further uniform (insertions and deletions have equal cost), also an $\tilde{\mathcal{O}}(n \sqrt{n})$-update time algorithm exists [Charalampopoulos, Kociumaka, Mozes, CPM 2020]. This is a substantial improvement over the static $\mathcal{O}(n^2)$ algorithm when $w \ll n$ or when we are dealing with uniform weights. In contrast, for inherently related problems such as Tree Edit Distance, Dyck Edit Distance, and RNA Folding, it has remained unknown whether it is possible to devise dynamic algorithms with an advantage over the static algorithm. In this paper, we resolve this question by showing that (weighted) Tree Edit Distance, Dyck Edit Distance, and RNA Folding admit no dynamic speedup: under well-known fine-grained assumptions we show that the best possible algorithm recomputes the solution from scratch after each update. Furthermore, we prove a quadratic per-update lower bound for unweighted Tree Edit Distance under the $k$-Clique Conjecture. This provides the first separation between dynamic unweighted String Edit Distance and unweighted Tree Edit Distance, problems whose relative difficulty in the static setting is still open.