Density-dependent transport coefficients in two-dimensional cellular aggregates
Subhadip Chakraborti, Vasily Zaburdaev

TL;DR
This paper develops a two-dimensional fluctuating hydrodynamics model for bacterial aggregation, deriving transport coefficients that depend on cell density, and predicts transport slowdown during colony formation.
Contribution
It introduces a novel hydrodynamics framework for cellular aggregates, deriving key transport coefficients from microscopic bacterial dynamics.
Findings
Transport coefficients depend on cell density and microscopic parameters.
Transport slowdown occurs during colony formation.
Provides analytical tools for experimental cellular aggregation systems.
Abstract
The large-scale collective behavior of biological systems can be characterized by macroscopic transport, which arises from the non-equilibrium microscopic interactions among individual constituents. A prominent example is the formation of dynamic aggregates by motile eukaryotic cells or bacteria mediated by active contractile forces. In this work, we develop the two-dimensional fluctuating hydrodynamics theory based on the microscopic dynamics of a model system of aggregation by \textit{Neisseria gonorrhoeae} bacteria. The derivation of two macroscopic transport coefficients of bulk diffusivity and conductivity which determine hydrodynamic current of cells is the central result of this work. By showing how transport coefficients depend on cell density and microscopic parameters of the system we predict transport slowdown during the colony formation process. This study provides valuable…
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