Making deep neural networks work for medical audio: representation, compression and domain adaptation

TL;DR

This thesis advances automated analysis of medical audio, especially infant cry sounds, by leveraging transfer learning, model compression, domain adaptation, and releasing a new dataset to improve healthcare accessibility.

Contribution

It introduces novel transfer learning, model compression, and domain adaptation techniques specifically tailored for medical audio analysis, along with a new open-source infant cry dataset.

Findings

Transfer learning improves infant cry classification accuracy.

Tensor decomposition achieves several hundred-fold model compression.

Domain adaptation enhances model generalization across datasets.

Abstract

This thesis addresses the technical challenges of applying machine learning to understand and interpret medical audio signals. The sounds of our lungs, heart, and voice convey vital information about our health. Yet, in contemporary medicine, these sounds are primarily analyzed through auditory interpretation by experts using devices like stethoscopes. Automated analysis offers the potential to standardize the processing of medical sounds, enable screening in low-resource settings where physicians are scarce, and detect subtle patterns that may elude human perception, thereby facilitating early diagnosis and treatment. Focusing on the analysis of infant cry sounds to predict medical conditions, this thesis contributes on four key fronts. First, in low-data settings, we demonstrate that large databases of adult speech can be harnessed through neural transfer learning to develop more accurate and robust models for infant cry analysis. Second, in cost-effective modeling, we introduce an end-to-end model compression approach for recurrent networks using tensor decomposition. Our method requires no post-hoc processing, achieves compression rates of several hundred-fold, and delivers accurate, portable models suitable for resource-constrained devices. Third, we propose novel domain adaptation techniques tailored for audio models and adapt existing methods from computer vision. These approaches address dataset bias and enhance generalization across domains while maintaining strong performance on the original data. Finally, to advance research in this domain, we release a unique, open-source dataset of infant cry sounds, developed in collaboration with clinicians worldwide. This work lays the foundation for recognizing the infant cry as a vital sign and highlights the transformative potential of AI-driven audio monitoring in shaping the future of accessible and affordable healthcare.