To Measure What Isn't There -- Visual Exploration of Missingness Structures Using Quality Metrics

TL;DR

This paper introduces a set of quality metrics designed to facilitate the visual exploration and analysis of structured missingness in high-dimensional data, aiding understanding of data quality issues.

Contribution

It proposes novel quality metrics for identifying and visualizing structured missingness, addressing scalability and interpretability in high-dimensional datasets.

Findings

Metrics effectively identify missingness patterns.

Visualization supports understanding data collection issues.

Use case demonstrates practical applicability.

Abstract

This paper contributes a set of quality metrics for identification and visual analysis of structured missingness in high-dimensional data. Missing values in data are a frequent challenge in most data generating domains and may cause a range of analysis issues. Structural missingness in data may indicate issues in data collection and pre-processing, but may also highlight important data characteristics. While research into statistical methods for dealing with missing data are mainly focusing on replacing missing values with plausible estimated values, visualization has great potential to support a more in-depth understanding of missingness structures in data. Nonetheless, while the interest in missing data visualization has increased in the last decade, it is still a relatively overlooked research topic with a comparably small number of publications, few of which address scalability issues. Efficient visual analysis approaches are needed to enable exploration of missingness structures in large and high-dimensional data, and to support informed decision-making in context of potential data quality issues. This paper suggests a set of quality metrics for identification of patterns of interest for understanding of structural missingness in data. These quality metrics can be used as guidance in visual analysis, as demonstrated through a use case exploring structural missingness in data from a real-life walking monitoring study. All supplemental materials for this paper are available at https://doi.org/10.25405/data.ncl.c.7741829.