Near-critical gene expression in embryonic boundary precision
Michael Vennettilli, Krishna P. Ramachandran, Andrew Mugler

TL;DR
This study models gene expression boundary formation in embryonic development, revealing that near-critical bistability optimizes boundary precision through a balance of sharpening and noise amplification.
Contribution
It introduces a minimal model for hb gene expression, identifying how tuning bistability and diffusion enhances boundary precision in embryonic patterning.
Findings
Boundary precision peaks near, but not at, the critical point.
Optimal diffusion and bistability levels maximize boundary accuracy.
Bistability enhances boundary sharpening while managing noise.
Abstract
Embryonic development relies on the formation of sharp, precise gene expression boundaries. In the fruit fly Drosophila melanogaster, boundary formation has been proposed to occur at a dynamical critical point. Yet, in the paradigmatic case of the hunchback (hb) gene, evidence suggests that boundary formation occurs in a bistable regime, not at the dynamical critical point. We develop a minimal model for hb expression and identify a single parameter that tunes the system from its monostable regime to its bistable regime, crossing the critical point in between. We find that boundary precision is maximized when the system is weakly bistable--near, but not at, the critical point--optimally negotiating the tradeoff between two key effects of bistability: sharpening the boundary and amplifying its noise. Incorporating the diffusion of Hb proteins into our model, we show that boundary…
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Taxonomy
TopicsGene Regulatory Network Analysis · Nonlinear Dynamics and Pattern Formation · Ecosystem dynamics and resilience
