Tailored 3D microphantoms: an essential tool for quantitative phase tomography analysis of organoids

TL;DR

This paper introduces custom-made 3D microphantoms for benchmarking and improving quantitative phase tomography systems, enabling more accurate, non-invasive analysis of biological organoids.

Contribution

It presents a novel fabrication method for biological microphantoms with sub-micrometer precision using two-photon polymerization, aiding system validation.

Findings

Demonstrated microphantoms' effectiveness across three QPT systems

Identified system-dependent errors in mass and morphology measurements

Established microphantoms as a standard for system optimization

Abstract

We present a novel approach for benchmarking and validating quantitative phase tomography (QPT) systems using three-dimensional microphantoms. These microphantoms, crafted from biological and imaging data, replicate the optical and structural properties of multicellular biological samples. Their fabrication featuring refractive index modulation at sub-micrometer details is enabled by two-photon polymerization. We showcase the effectiveness of our technique via a round-robin test of healthy and tumoral liver organoid phantoms across three different QPT systems. This test reveals sample- and system-dependent errors in measuring dry mass and morphology. Tailored microphantoms establish the gold standard for the optimization of hardware setups, reconstruction strategies and error assessment, paving the way for novel non-invasive, label-free measurements of 3D biological samples.