Effective patchiness from critical points of a coarse-grained protein model with explicit shape and charge anisotropy
Jens Weimar, Frank Hirschmann, Martin Oettel

TL;DR
This study investigates how charge and shape anisotropy affect the phase behavior of a coarse-grained protein model, highlighting the limitations of traditional colloidal stability criteria when applied to anisotropic protein interactions.
Contribution
The paper introduces methods to assign effective patchiness to a protein model and compares its critical properties to patchy particle models, revealing the impact of anisotropy on phase behavior.
Findings
Doubling native charges increases critical temperature by ~14%.
Protein model corresponds to a 3-5 patch Kern-Frenkel model.
Applying B2* criteria from colloidal theory requires caution with anisotropic models.
Abstract
Colloidal model systems are successful in rationalizing emergent phenomena like aggregation, rheology and phase behaviour of protein solutions. Colloidal theory in conjunction with isotropic interaction models is often employed to estimate the stability of such solutions. In particular, a universal criterion for the reduced second virial coefficient at the critical point is frequently invoked which is based on the behavior of short-range attractive fluids (Noro-Frenkel rule, ). However, if anisotropic models for the protein-protein interaction are considered, e.g. the Kern-Frenkel (KF) patchy particle model, the value of the criterion is shifted to lower values and explicitly depends on the number of patches. If an explicit shape anisotropy is considered, as e.g. in a coarse-grained protein model, the normalization of becomes ambiguous to some…
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Taxonomy
TopicsProtein Structure and Dynamics · Stochastic processes and statistical mechanics · Proteins in Food Systems
