FEBio FINESSE: An open-source finite element simulation approach to estimate in vivo heart valve strains using shape enforcement

TL;DR

This paper introduces FINESSE, an open-source finite element simulation method that matches in vivo heart valve geometries and estimates leaflet strains without requiring patient-specific material data, aiding clinical studies.

Contribution

The novel contribution is an open-source approach that enforces shape matching in finite element models of heart valves without needing detailed patient-specific tissue properties.

Findings

FINESSE accurately matches in vivo valve surfaces with median errors less than voxel size.

It estimates leaflet strains within +/- 0.03 strain, demonstrating high precision.

The method successfully applied to pediatric patients, revealing valve-specific strain differences.

Abstract

Finite element simulations are an enticing tool to evaluate heart valve function in healthy and diseased patients; however, patient-specific simulations derived from 3D echocardiography are hampered by several technical challenges. In this work, we present an open-source method to enforce matching between finite element simulations and in vivo image-derived heart valve geometry in the absence of patient-specific material properties, leaflet thickness, and chordae tendineae structures. We evaluate FEBio Finite Element Simulations with Shape Enforcement (FINESSE) using three synthetic test cases covering a wide range of model complexity. Our results suggest that FINESSE can be used to not only enforce finite element simulations to match an image-derived surface, but to also estimate the first principal leaflet strains within +/- 0.03 strain. Key FINESSE considerations include: (i) appropriately defining the user-defined penalty, (ii) omitting the leaflet commissures to improve simulation convergence, and (iii) emulating the chordae tendineae behavior via prescribed leaflet free edge motion or a chordae emulating force. We then use FINESSE to estimate the in vivo valve behavior and leaflet strains for three pediatric patients. In all three cases, FINESSE successfully matched the target surface with median errors similar to or less than the smallest voxel dimension. Further analysis revealed valve-specific findings, such as the tricuspid valve leaflet strains of a 2-day old patient with HLHS being larger than those of two 13-year old patients. The development of this open source pipeline will enable future studies to begin linking in vivo leaflet mechanics with patient outcomes