MeSH Concept Relevance and Knowledge Evolution: A Data-driven Perspective

TL;DR

This paper introduces a data-driven, network-based approach to quantify and analyze the relevance and evolution of MeSH concepts over time, aiding in the maintenance of biomedical knowledge systems.

Contribution

It presents a novel method combining information theory and network analysis to measure multiple relevance aspects of MeSH concepts using article annotations and citation networks.

Findings

Evolving concepts have higher mean relevance than unchanged ones.

Relevance scores differ significantly between retracted and non-retracted article annotations.

The framework effectively captures the dynamics of MeSH concept relevance over time.

Abstract

The Medical Subject Headings (MeSH), one of the main knowledge organization systems in the biomedical domain, continuously evolves to reflect the latest scientific discoveries in health and life sciences. Previous research has focused on quantifying information in MeSH primarily through its hierarchical structure. In this work, we propose a data-driven approach based on information theory and network analysis to quantify the relevance of MeSH concepts. Our method leverages article annotations and their citation networks to compute four aspects of relevance -- informativeness, usefulness, disruptiveness, and influence -- over time. Using both the citation network and the MeSH hierarchy, we compute these relevance aspects and apply an aggregation algorithm to propagate scores to parent nodes. We evaluated our approach on MeSH terminology changes and showed that it effectively captures the evolution of concepts. The mean relevance of evolving concepts is higher compared to concepts that remained unchanged ($2.09E-03$ vs. $8.46E-04$). Moreover, we validated the framework by analyzing retracted articles and found that concepts used to annotate retracted articles (mean relevance: 0.17) differ substantially from those annotating non-retracted ones (mean relevance: 0.15). Overall, the proposed framework provides an effective method for ranking concept relevance and can support the maintenance of evolving knowledge organization systems.