Transforming Agriculture with Intelligent Data Management and Insights

TL;DR

This paper introduces ADMA, an innovative data management infrastructure designed to enhance agricultural data analysis by ensuring FAIR principles, supporting semantic interoperability, and integrating scalable, interactive, and extensible features for multidisciplinary datasets.

Contribution

The paper presents ADMA, a comprehensive, FAIR-compliant data management system tailored for agriculture, integrating semantic data handling, multiple interfaces, high-performance scalability, and extensibility.

Findings

Supports semantic data management across disciplines

Provides multiple user interfaces including web GUI, CLI, and API

Utilizes HPC for scalable data processing

Abstract

Modern agriculture faces grand challenges to meet increased demands for food, fuel, feed, and fiber with population growth under the constraints of climate change and dwindling natural resources. Data innovation is urgently required to secure and improve the productivity, sustainability, and resilience of our agroecosystems. As various sensors and Internet of Things (IoT) instrumentation become more available, affordable, reliable, and stable, it has become possible to conduct data collection, integration, and analysis at multiple temporal and spatial scales, in real-time, and with high resolutions. At the same time, the sheer amount of data poses a great challenge to data storage and analysis, and the \textit{de facto} data management and analysis practices adopted by scientists have become increasingly inefficient. Additionally, the data generated from different disciplines, such as genomics, phenomics, environment, agronomy, and socioeconomic, can be highly heterogeneous. That is, datasets across disciplines often do not share the same ontology, modality, or format. All of the above make it necessary to design a new data management infrastructure that implements the principles of Findable, Accessible, Interoperable, and Reusable (FAIR). In this paper, we propose Agriculture Data Management and Analytics (ADMA), which satisfies the FAIR principles. Our new data management infrastructure is intelligent by supporting semantic data management across disciplines, interactive by providing various data management/analysis portals such as web GUI, command line, and API, scalable by utilizing the power of high-performance computing (HPC), extensible by allowing users to load their own data analysis tools, trackable by keeping track of different operations on each file, and open by using a rich set of mature open source technologies.