XLuminA: An Auto-differentiating Discovery Framework for Super-Resolution Microscopy
Carla Rodr\'iguez, S\"oren Arlt, Leonhard M\"ockl, Mario Krenn

TL;DR
XLuminA is an AI-driven framework that accelerates the discovery of super-resolution microscopy techniques, re-discovering foundational experiments and identifying new experimental blueprints with sub-diffraction imaging capabilities.
Contribution
The paper introduces XLuminA, a fast, open-source AI framework using JAX for discovering novel super-resolution microscopy methods.
Findings
Achieves 4 orders of magnitude speed-up over traditional methods
Re-discovers three foundational microscopy experiments
Identifies a new sub-diffraction imaging blueprint
Abstract
Driven by human ingenuity and creativity, the discovery of super-resolution techniques, which circumvent the classical diffraction limit of light, represent a leap in optical microscopy. However, the vast space encompassing all possible experimental configurations suggests that some powerful concepts and techniques might have not been discovered yet, and might never be with a human-driven direct design approach. Thus, AI-based exploration techniques could provide enormous benefit, by exploring this space in a fast, unbiased way. We introduce XLuminA, an open-source computational framework developed using JAX, which offers enhanced computational speed enabled by its accelerated linear algebra compiler (XLA), just-in-time compilation, and its seamlessly integrated automatic vectorization, auto-differentiation capabilities and GPU compatibility. Remarkably, XLuminA demonstrates a speed-up…
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Taxonomy
TopicsAdvanced Fluorescence Microscopy Techniques · Optical Coherence Tomography Applications · Digital Holography and Microscopy
