TreeLearn: A deep learning method for segmenting individual trees from ground-based LiDAR forest point clouds

TL;DR

TreeLearn is a deep learning approach for automatic, accurate segmentation of individual trees from ground-based LiDAR forest point clouds, improving over existing methods and providing a new benchmark dataset.

Contribution

The paper introduces TreeLearn, a fully automatic deep learning method for tree segmentation, and provides a new manually segmented forest dataset for training and evaluation.

Findings

TreeLearn performs as well as the training data algorithm.

Fine-tuning improves TreeLearn's performance significantly.

Outperforms recent state-of-the-art methods.

Abstract

Laser-scanned point clouds of forests make it possible to extract valuable information for forest management. To consider single trees, a forest point cloud needs to be segmented into individual tree point clouds. Existing segmentation methods are usually based on hand-crafted algorithms, such as identifying trunks and growing trees from them, and face difficulties in dense forests with overlapping tree crowns. In this study, we propose TreeLearn, a deep learning-based approach for tree instance segmentation of forest point clouds. TreeLearn is trained on already segmented point clouds in a data-driven manner, making it less reliant on predefined features and algorithms. Furthermore, TreeLearn is implemented as a fully automatic pipeline and does not rely on extensive hyperparameter tuning, which makes it easy to use. Additionally, we introduce a new manually segmented benchmark forest dataset containing 156 full trees. The data is generated by mobile laser scanning and contributes to create a larger and more diverse data basis for model development and fine-grained instance segmentation evaluation. We trained TreeLearn on forest point clouds of 6665 trees, labeled using the Lidar360 software. An evaluation on the benchmark dataset shows that TreeLearn performs as well as the algorithm used to generate its training data. Furthermore, the performance can be vastly improved by fine-tuning the model using manually annotated datasets. We evaluate TreeLearn on our benchmark dataset and the Wytham Woods dataset, outperforming the recent SegmentAnyTree, ForAINet and TLS2Trees methods. The TreeLearn code and all datasets that were created in the course of this work are made publicly available.