Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?
Anson Bastos, Kuldeep Singh, Abhishek Nadgeri, Johannes Hoffart,, Toyotaro Suzumura, Manish Singh

TL;DR
This paper introduces Knowledge Persistence, a topological data analysis-based method using persistent homology, to evaluate knowledge graph completion efficiently, significantly reducing evaluation time while maintaining high correlation with traditional metrics.
Contribution
The paper presents a novel, topology-based evaluation metric for knowledge graph completion that drastically reduces computational time compared to traditional ranking methods.
Findings
High correlation with standard metrics like Hits@N, MR, MRR
Evaluation time reduced by approximately 99.96%
Evaluation time decreased from 18 hours to 27 seconds in some cases
Abstract
In this paper we present a novel method, (), for faster evaluation of Knowledge Graph (KG) completion approaches. Current ranking-based evaluation is quadratic in the size of the KG, leading to long evaluation times and consequently a high carbon footprint. addresses this by representing the topology of the KG completion methods through the lens of topological data analysis, concretely using persistent homology. The characteristics of persistent homology allow to evaluate the quality of the KG completion looking only at a fraction of the data. Experimental results on standard datasets show that the proposed metric is highly correlated with ranking metrics (Hits@N, MR, MRR). Performance evaluation shows that is computationally efficient: In some cases, the evaluation time (validation+test) of a KG…
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Taxonomy
TopicsTopological and Geometric Data Analysis · Advanced Graph Neural Networks · Bioinformatics and Genomic Networks
