Symbiotic and antagonistic disease dynamics on networks using bond percolatio
Peter Mann, V. Anne Smith, John Mitchell, Simon Dobson

TL;DR
This paper develops an exact generating function approach to analyze the equilibrium states of bond percolation on networks, revealing how disease interactions and network clustering influence epidemic outcomes.
Contribution
It introduces a novel method to study coupled disease dynamics on networks using generating functions, accounting for clustering and assortativity effects.
Findings
Clustering generally reduces second strain outbreak size.
Positive assortativity can invert clustering effects for highly transmissible diseases.
The second strain's evolution depends heavily on coupling details.
Abstract
In this paper we introduce a novel description of the equilibrium state of a bond percolation process on random graphs using the exact method of generating functions. This allows us to find the expected size of the giant connected component (GCC) of two sequential bond percolation processes in which the bond occupancy probability of the second process is modulated (increased or decreased) by a node being inside or outside of the GCC created by the first process. In the context of epidemic spreading this amounts to both a antagonistic partial immunity or a synergistic partial coinfection interaction between the two sequential diseases. We examine configuration model networks with tunable clustering. We find that the emergent evolutionary behaviour of the second strain is highly dependent on the details of the coupling between the strains. Contact clustering generally reduces the outbreak…
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