Exploring Complex Dynamical Systems via Nonconvex Optimization
Hunter Elliott

TL;DR
This paper introduces an optimization-based machine learning approach to analyze complex dynamical systems, exemplified by a novel reaction-diffusion model that reveals new states and behaviors such as pattern formation and nonequilibrium states.
Contribution
It presents a new optimization-driven method for studying complex dynamical systems using machine learning tools, applied to a novel reaction-diffusion model.
Findings
Identified new states and behaviors in the reaction-diffusion model
Revealed pattern formation and dissipation-maximizing states
Discovered replication-like dynamical structures
Abstract
Cataloging the complex behaviors of dynamical systems can be challenging, even when they are well-described by a simple mechanistic model. If such a system is of limited analytical tractability, brute force simulation is often the only resort. We present an alternative, optimization-driven approach using tools from machine learning. We apply this approach to a novel, fully-optimizable, reaction-diffusion model which incorporates complex chemical reaction networks (termed "Dense Reaction-Diffusion Network" or "Dense RDN"). This allows us to systematically identify new states and behaviors, including pattern formation, dissipation-maximizing nonequilibrium states, and replication-like dynamical structures.
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Taxonomy
TopicsGene Regulatory Network Analysis · Machine Learning in Materials Science · Computational Drug Discovery Methods
