Structural analysis of water networks
Michele Benzi, Isabella Daidone, Chiara Faccio, Laura Zanetti-Polzi

TL;DR
This paper explores the structural properties of water networks using graph theory, providing a detailed topological and geometrical analysis to understand water's anomalies and phase behaviors.
Contribution
It advances previous work by applying diverse connectivity, centrality, and global metrics to deepen the understanding of water network structures through graph-theoretic methods.
Findings
Identification of water phases via graph metrics
Enhanced topological characterization of water networks
Application of multiple graph measures for structural analysis
Abstract
Liquid water, besides being fundamental for life on Earth, has long fascinated scientists due to several anomalies. Different hypotheses have been put forward to explain these peculiarities. The most accredited one foresees the presence in the supercooled region of two phases at different densities: the low-density liquid phase and the high-density liquid phase. In our previous work [Faccio et al., J. Mol. Liq. 355 (2022): 118922], we showed that it is possible to identify these two forms in water networks through a computational approach based on molecular dynamics simulation and on the calculation of the total communicability of the associated graph, in which the nodes correspond to water molecules and the edges represent the connections (interactions) between molecules. In this paper, we present a more in-depth investigation of the application of graph-theory based approaches to the…
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Taxonomy
TopicsSpectroscopy and Quantum Chemical Studies · Molecular spectroscopy and chirality · Protein Structure and Dynamics
