Artificial Intelligence Models for Cell Type and Subtype Identification Based on Single-Cell RNA Sequencing Data in Vision Science
Yeganeh Madadi, Aboozar Monavarfeshani, Hao Chen, W. Daniel Stamer,, Robert W. Williams, and Siamak Yousefi

TL;DR
This paper reviews recent AI-based methods for identifying cell types and subtypes using single-cell RNA sequencing data in vision science, highlighting advancements that improve speed and accuracy over traditional approaches.
Contribution
It provides a comprehensive overview of recent AI techniques applied to cell-type identification in single-cell RNA sequencing data within vision science.
Findings
AI methods enhance speed and accuracy of cell-type identification
Recent advances enable more precise characterization of cell subtypes
Review highlights integration of AI in vision-related single-cell analysis
Abstract
Single-cell RNA sequencing (scRNA-seq) provides a high throughput, quantitative and unbiased framework for scientists in many research fields to identify and characterize cell types within heterogeneous cell populations from various tissues. However, scRNA-seq based identification of discrete cell-types is still labor intensive and depends on prior molecular knowledge. Artificial intelligence has provided faster, more accurate, and user-friendly approaches for cell-type identification. In this review, we discuss recent advances in cell-type identification methods using artificial intelligence techniques based on single-cell and single-nucleus RNA sequencing data in vision science.
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Taxonomy
TopicsSingle-cell and spatial transcriptomics · Neuroinflammation and Neurodegeneration Mechanisms · Cell Image Analysis Techniques
