Squeezing stationary distributions of stochastic chemical reaction systems
Yuji Hirono, Ryo Hanai

TL;DR
This paper introduces a novel analytical method for computing stationary distributions of stochastic chemical reaction systems by leveraging an analogy with quantum squeezed states, extending the class of systems with known distributions.
Contribution
It develops a new approach using second quantization and squeezed states to find stationary distributions for reaction networks lacking complex-balanced steady states.
Findings
Analytic expressions for stationary distributions of transformed reaction networks.
Extension of product-form Poisson distributions to squeezed states.
New insights into non-complex-balanced reaction systems.
Abstract
Stochastic modeling of chemical reaction systems based on master equations has been an indispensable tool in physical sciences. In the long-time limit, the properties of these systems are characterized by stationary distributions of chemical master equations. In this paper, we describe a novel method for computing stationary distributions analytically, based on a parallel formalism between stochastic chemical reaction systems and second quantization. Anderson, Craciun, and Kurtz showed that, when the rate equation for a reaction network admits a complex-balanced steady-state solution, the corresponding stochastic reaction system has a stationary distribution of a product form of Poisson distributions. In a formulation of stochastic reaction systems using the language of second quantization initiated by Doi, product-form Poisson distributions correspond to coherent states. Pursuing this…
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Taxonomy
TopicsMolecular Junctions and Nanostructures · Gene Regulatory Network Analysis · Spectroscopy and Quantum Chemical Studies
