Multiple testing of composite null hypotheses for discrete data using randomized $p$-values

TL;DR

This paper introduces two randomized $p$-value methods to address conservativeness in discrete data hypothesis testing, improving validity and power in composite null scenarios through simulations and real data analysis.

Contribution

It proposes single-stage and two-stage randomized $p$-values for discrete data, demonstrating their validity and effectiveness in reducing conservativeness compared to traditional methods.

Findings

Randomized $p$-values are less conservative under the null hypothesis.

Proposed methods maintain validity across various discrete models.

Power analysis shows effectiveness increases with sample size.

Abstract

$P$-values that are derived from continuously distributed test statistics are typically uniformly distributed on $(0,1)$ under least favorable parameter configurations (LFCs) in the null hypothesis. Conservativeness of a $p$-value $P$ (meaning that $P$ is under the null hypothesis stochastically larger than a random variable which is uniformly distributed on $(0,1)$) can occur if the test statistic from which $P$ is derived is discrete, or if the true parameter value under the null is not an LFC. To deal with both of these sources of conservativeness, we present two approaches utilizing randomized $p$-values, namely single-stage and two-stage randomization. We illustrate their effectiveness for testing a composite null hypothesis under a binomial model. We also give an example of how the proposed $p$-values can be used to test a composite null in group testing designs. Similar to previous findings, we find that the proposed randomized $p$-values are less conservative compared to non-randomized $p$-values under the null hypothesis, but that they are stochastically not smaller under the alternative. The problem of establishing the validity of randomized $p$-values is not trivial and has received attention in previous literature. We show that our proposed randomized $p$-values are valid under various discrete statistical models which are such that the distribution of the corresponding test statistic belongs to an exponential family. The behaviour of the power function for the tests based on the proposed randomized $p$-values as a function of the sample size is also investigated. Simulations and a real data analysis are used to compare the different considered $p$-values.