Quantum tunneling of three-spine solitons through excentric barriers

TL;DR

This paper investigates how massive barriers within protein structures affect the movement of solitons, revealing that localized barriers can effectively reflect or trap solitons, influencing energy transport in proteins.

Contribution

It introduces the concept that excentric barriers can control soliton dynamics in proteins, expanding understanding of energy regulation mechanisms.

Findings

Excentric barriers reflect or trap three-spine solitons effectively.

Wider, lower-energy solitons require heavier barriers for reflection or trapping.

Soliton control can be achieved by adjusting width or effective mass of protein subunits.

Abstract

Macromolecular protein complexes catalyze essential physiological processes that sustain life. Various interactions between protein subunits could increase the effective mass of certain peptide groups, thereby compartmentalizing protein $\alpha$-helices. Here, we study the differential effects of applied massive barriers upon the soliton-assisted energy transport within proteins. We demonstrate that excentric barriers, localized onto a single spine in the protein $\alpha$-helix, reflect or trap three-spine solitons as effectively as concentric barriers with comparable total mass. Furthermore, wider protein solitons, whose energy is lower, require heavier massive barriers for soliton reflection or trapping. Regulation of energy transport, delivery and utilization at protein active sites could thus be achieved through control of the soliton width, or of the effective mass of the protein subunits.