Augmented Transition Path Theory for Sequences of Events
Chatipat Lorpaiboon, Jonathan Weare, Aaron R. Dinner

TL;DR
This paper extends transition path theory to analyze sequences of events in reactions, enabling a statistical understanding of complex reaction pathways beyond simple A-to-B transitions.
Contribution
It introduces a generalized framework for transition path theory that accounts for specified sequences of events in reaction trajectories.
Findings
Successfully applied to example reactions with sequential events
Provides a new statistical tool for complex reaction analysis
Enhances understanding of multi-step reaction mechanisms
Abstract
Transition path theory provides a statistical description of the dynamics of a reaction in terms of local spatial quantities. In its original formulation, it is limited to reactions that consist of trajectories flowing from a reactant set A to a product set B. We extend the basic concepts and principles of transition path theory to reactions in which trajectories exhibit a specified sequence of events and illustrate the utility of this generalization on examples.
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Taxonomy
TopicsGene Regulatory Network Analysis · History and advancements in chemistry
