Stratification of carotid atheromatous plaque using interpretable deep learning methods on B-mode ultrasound images

TL;DR

This paper presents an interpretable deep learning approach using CNNs for classifying carotid ultrasound images to assess stroke risk, addressing class imbalance and revealing potential new biomarkers.

Contribution

It introduces an ensemble, cost-sensitive deep learning method with interpretability techniques for carotid plaque risk stratification from ultrasound images.

Findings

Achieved AUC of 73% in classification.

Demonstrated model interpretability for biomarker discovery.

Addressed class imbalance with ensemble and resampling strategies.

Abstract

Carotid atherosclerosis is the major cause of ischemic stroke resulting in significant rates of mortality and disability annually. Early diagnosis of such cases is of great importance, since it enables clinicians to apply a more effective treatment strategy. This paper introduces an interpretable classification approach of carotid ultrasound images for the risk assessment and stratification of patients with carotid atheromatous plaque. To address the highly imbalanced distribution of patients between the symptomatic and asymptomatic classes (16 vs 58, respectively), an ensemble learning scheme based on a sub-sampling approach was applied along with a two-phase, cost-sensitive strategy of learning, that uses the original and a resampled data set. Convolutional Neural Networks (CNNs) were utilized for building the primary models of the ensemble. A six-layer deep CNN was used to automatically extract features from the images, followed by a classification stage of two fully connected layers. The obtained results (Area Under the ROC Curve (AUC): 73%, sensitivity: 75%, specificity: 70%) indicate that the proposed approach achieved acceptable discrimination performance. Finally, interpretability methods were applied on the model's predictions in order to reveal insights on the model's decision process as well as to enable the identification of novel image biomarkers for the stratification of patients with carotid atheromatous plaque.Clinical Relevance-The integration of interpretability methods with deep learning strategies can facilitate the identification of novel ultrasound image biomarkers for the stratification of patients with carotid atheromatous plaque.