Using unsupervised machine learning to quantify physical activity from accelerometry in a diverse and rapidly changing population

TL;DR

This study introduces an unsupervised machine learning method, specifically a hidden semi Markov model, to quantify physical activity from accelerometry data in diverse children, outperforming traditional cut points in sensitivity and applicability.

Contribution

The paper presents a novel unsupervised approach using hidden semi Markov models to analyze accelerometry data, eliminating the need for population-specific calibration.

Findings

Unsupervised approach correlates better with mobility and social-cognitive measures.

Method is more sensitive and cost-effective than traditional cut points.

Applicable to diverse and rapidly changing populations.

Abstract

Accelerometers are widely used to measure physical activity behaviour, including in children. The traditional method for processing acceleration data uses cut points to define physical activity intensity, relying on calibration studies that relate the magnitude of acceleration to energy expenditure. However, these relationships do not generalise across diverse populations and hence they must be parametrised for each subpopulation (e.g., age groups) which is costly and makes studies across diverse populations and over time difficult. A data driven approach that allows physical activity intensity states to emerge from the data, without relying on parameters derived from external populations, and offers a new perspective on this problem and potentially improved results. We applied an unsupervised machine learning approach, namely a hidden semi Markov model, to segment and cluster the accelerometer data recorded from 279 children (9 to 38 months old) with a diverse range of physical and social-cognitive abilities (measured using the Paediatric Evaluation of Disability Inventory). We benchmarked this analysis with the cut points approach calculated using the best available thresholds for the population. Time spent active as measured by this unsupervised approach correlated more strongly with measures of the childs mobility, social-cognitive capacity, independence, daily activity, and age than that measured using the cut points approach. Unsupervised machine learning offers the potential to provide a more sensitive, appropriate, and cost-effective approach to quantifying physical activity behaviour in diverse populations, compared to the current cut points approach. This, in turn, supports research that is more inclusive of diverse or rapidly changing populations.