Global alignment for relation extraction in Microbiology
Anfu Tang (LISN), Claire N\'edellec, Pierre Zweigenbaum (LISN), Louise, Del\'eger, Robert Bossy

TL;DR
This paper presents a global alignment method combined with syntactic information for relation extraction in microbiology texts, demonstrating competitive or superior performance to LSTM models on two relation extraction tasks.
Contribution
Introduces a global alignment approach integrated with syntactic features for relation extraction, offering an alternative to neural network models in microbiology.
Findings
Performance comparable or better than LSTM on two RE tasks
Effective use of syntactic information in relation extraction
Potential for simpler models with competitive accuracy
Abstract
We investigate a method to extract relations from texts based on global alignment and syntactic information. Combined with SVM, this method is shown to have a performance comparable or even better than LSTM on two RE tasks.
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Taxonomy
TopicsBiomedical Text Mining and Ontologies · Topic Modeling · Language and cultural evolution
MethodsTanh Activation · Sigmoid Activation · Support Vector Machine · Long Short-Term Memory
