Unsupervised topological learning approach of crystal nucleation
S\'ebastien Becker, Emilie Devijver, R\'emi Molinier, and No\"el Jakse

TL;DR
This paper introduces an unsupervised topological learning method using persistent homology to analyze atomic-scale crystal nucleation mechanisms in metals, revealing complex structural features and pathways beyond classical theories.
Contribution
It presents a novel unsupervised topological approach for studying crystal nucleation at the atomic level without prior assumptions, applicable to monatomic metals.
Findings
Simultaneous translational and orientational ordering during nucleation.
Nucleation pathways vary depending on the element.
Features observed go beyond classical nucleation theory.
Abstract
Nucleation phenomena commonly observed in our every day life are of fundamental, technological and societal importance in many areas, but some of their most intimate mechanisms remain however to be unravelled. Crystal nucleation, the early stages where the liquid-to-solid transition occurs upon undercooling, initiates at the atomic level on nanometre length and sub-picoseconds time scales and involves complex multidimensional mechanisms with local symmetry breaking that can hardly be observed experimentally in the very details. To reveal their structural features in simulations without a priori, an unsupervised learning approach founded on topological descriptors loaned from persistent homology concepts is proposed. Applied here to monatomic metals, it shows that both translational and orientational ordering always come into play simultaneously when homogeneous nucleation starts in…
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Taxonomy
TopicsTopological and Geometric Data Analysis · Computational Drug Discovery Methods
