Stationarity and inference in multistate promoter models of stochastic gene expression via stick-breaking measures
William Lippitt, Sunder Sethuraman, Xueying Tang

TL;DR
This paper introduces a novel stick-breaking method to explicitly derive and sample from the stationary distribution in multistate promoter models of gene expression, enabling improved inference and model selection.
Contribution
The authors develop a constructive stick-breaking approach for the stationary distribution in multistate gene expression models, extending previous restricted solutions.
Findings
Explicit stationary distribution derived using stick-breaking
Method enables direct sampling from the stationary distribution
Numerical Bayesian experiments demonstrate practical inference applications
Abstract
In a general stochastic multistate promoter model of dynamic mRNA/protein interactions, we identify the stationary joint distribution of the promoter state, mRNA, and protein levels through an explicit `stick-breaking' construction of interest in itself. This derivation is a constructive advance over previous work where the stationary distribution is solved only in restricted cases. Moreover, the stick-breaking construction allows to sample directly from the stationary distribution, permitting inference procedures and model selection. In this context, we discuss numerical Bayesian experiments to illustrate the results.
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Taxonomy
TopicsGene Regulatory Network Analysis · Bacterial Genetics and Biotechnology · RNA and protein synthesis mechanisms
