Sharp upper and lower bounds on a restricted class of convex characters
Steven Kelk, Ruben Meuwese

TL;DR
This paper establishes sharp bounds on the number of convex characters with blocks of size at least k in unrooted binary trees, revealing how tree topology influences these counts and exploring potential algorithmic uses.
Contribution
It characterizes tree topologies that maximize and minimize the number of convex characters with size constraints for all k ≥ 3, extending previous work on k=1,2.
Findings
Identifies trees with extremal counts of convex characters for k ≥ 3.
Provides explicit formulas and exponential bounds for g_k.
Highlights potential algorithmic applications of these bounds.
Abstract
Let be an unrooted binary tree with distinctly labelled leaves. Deriving its name from the field of phylogenetics, a convex character on is simply a partition of the leaves such that the minimal spanning subtrees induced by the blocks of the partition are mutually disjoint. In earlier work Kelk and Stamoulis (Advances in Applied Mathematics 84 (2017), pp. 34--46) defined as the number of convex characters where each block has at least leaves. Exact expressions were given for and , where the topology of turns out to be irrelevant, and it was noted that for topological neutrality no longer holds. In this article, for every we describe tree topologies achieving the maximum and minimum values of and determine corresponding expressions and exponential bounds for . Finally, we…
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Taxonomy
TopicsGenome Rearrangement Algorithms · Genomics and Phylogenetic Studies
