Attaining entropy production and dissipation maps from Brownian movies via neural networks
Youngkyoung Bae, Dong-Kyum Kim, Hawoong Jeong

TL;DR
This paper introduces a neural network-based method to estimate entropy production and generate dissipation maps from movies of stochastic systems, enabling analysis of nonequilibrium dynamics without tracking variables.
Contribution
It develops an unsupervised convolutional neural network approach that quantifies entropy production and visualizes dissipation patterns directly from image data.
Findings
Accurately measures entropy production in simulated systems
Creates detailed dissipation maps from movies
Performs well with noisy and low-resolution data
Abstract
Quantifying entropy production (EP) is essential to understand stochastic systems at mesoscopic scales, such as living organisms or biological assemblies. However, without tracking the relevant variables, it is challenging to figure out where and to what extent EP occurs from recorded time-series image data from experiments. Here, applying a convolutional neural network (CNN), a powerful tool for image processing, we develop an estimation method for EP through an unsupervised learning algorithm that calculates only from movies. Together with an attention map of the CNN's last layer, our method can not only quantify stochastic EP but also produce the spatiotemporal pattern of the EP (dissipation map). We show that our method accurately measures the EP and creates a dissipation map in two nonequilibrium systems, the bead-spring model and a network of elastic filaments. We further confirm…
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Taxonomy
TopicsNeural dynamics and brain function · Advanced Thermodynamics and Statistical Mechanics · Cell Image Analysis Techniques
