TL;DR
MomentClosure.jl is a Julia package that automates the derivation of moment equations for chemical reaction networks, facilitating stochastic biochemical modeling when exact solutions are infeasible.
Contribution
It introduces an automated tool for deriving moment closure equations in Julia, expanding capabilities for stochastic biochemical system analysis.
Findings
Supports a wide range of reaction networks
Reduces computational cost compared to simulations
Provides accessible open-source implementation
Abstract
MomentClosure.jl is a Julia package providing automated derivation of the time-evolution equations of the moments of molecule numbers for virtually any chemical reaction network using a wide range of moment closure approximations. It extends the capabilities of modelling stochastic biochemical systems in Julia and can be particularly useful when exact analytic solutions of the chemical master equation are unavailable and when Monte Carlo simulations are computationally expensive. MomentClosure.jl is freely accessible under the MIT license. Source code and documentation are available at https://github.com/augustinas1/MomentClosure.jl
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