Structure Learning of Contextual Markov Networks using Marginal Pseudo-likelihood
Johan Pensar, Henrik Nyman, Jukka Corander

TL;DR
This paper introduces a new scoring method based on marginal pseudo-likelihood for learning the structure of complex contextual Markov networks, improving model selection without the need for chordality assumptions.
Contribution
It proposes a novel, analytically tractable criterion for structure learning in contextual Markov networks that is consistent and applicable to general cases.
Findings
The method is computationally feasible for large structures.
It achieves high predictive accuracy in experiments.
The criterion is theoretically proven to be consistent.
Abstract
Markov networks are popular models for discrete multivariate systems where the dependence structure of the variables is specified by an undirected graph. To allow for more expressive dependence structures, several generalizations of Markov networks have been proposed. Here we consider the class of contextual Markov networks which takes into account possible context-specific independences among pairs of variables. Structure learning of contextual Markov networks is very challenging due to the extremely large number of possible structures. One of the main challenges has been to design a score, by which a structure can be assessed in terms of model fit related to complexity, without assuming chordality. Here we introduce the marginal pseudo-likelihood as an analytically tractable criterion for general contextual Markov networks. Our criterion is shown to yield a consistent structure…
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