Homology Localization Through the Looking-Glass of Parameterized Complexity Theory
Nello Blaser, Erlend Raa V{\aa}gset

TL;DR
This paper investigates the computational complexity of homology localization, proving its hardness in approximation and offering two fixed-parameter tractable algorithms based on treewidth, with practical performance differences.
Contribution
It introduces the first fixed-parameter algorithms for homology localization using treewidth and establishes their tight complexity bounds.
Findings
Homology localization is W[1]-hard to approximate when parameterized by solution size.
Two FPT algorithms based on treewidth are designed and implemented.
One algorithm outperforms the other in practical scenarios.
Abstract
Finding a cycle of lowest weight that represents a homology class in a simplicial complex is known as homology localization (HL). Here we address this NP-complete problem using parameterized complexity theory. We show that it is W[1]-hard to approximate the HL problem when it is parameterized by solution size. We have also designed and implemented two algorithms based on treewidth solving the HL problem in FPT-time. Both algorithms are ETH-tight but our results shows that one outperforms the other in practice.
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Taxonomy
TopicsTopological and Geometric Data Analysis · Commutative Algebra and Its Applications · Computational Drug Discovery Methods
