Diversity in immunogenomics: the value and the challenge

TL;DR

This paper discusses the opportunities and challenges in immunogenomics, emphasizing the need for diverse genomic data to improve understanding of immune responses across different populations.

Contribution

It highlights the importance of expanding germline gene databases and AIRR-seq studies to include non-European populations for better immune response insights.

Findings

Most AIRR-seq studies focus on European populations

Limited germline gene data hampers immune response analysis in diverse groups

Expanding databases will enhance diagnostics and personalized medicine

Abstract

With the advent of high-throughput sequencing technologies, the fields of immunogenomics and adaptive immune receptor repertoire research are facing both opportunities and challenges. Adaptive immune receptor repertoire sequencing (AIRR-seq) has become an increasingly important tool to characterize T and B cell responses in settings of interest. However, the majority of AIRR-seq studies conducted so far were performed in individuals of European ancestry, restricting the ability to identify variation in human adaptive immune responses across populations and limiting their applications. As AIRR-seq studies depend on the ability to assign VDJ sequence reads to the correct germline gene segments, efforts to characterize the genomic loci that encode adaptive immune receptor genes in different populations are urgently needed. The availability of comprehensive germline gene databases and further applications of AIRR-seq studies to individuals of non-European ancestry will substantially enhance our understanding of human adaptive immune responses, promote the development of effective diagnostics and treatments, and eventually advance precision medicine.