Reproducible Research: A Retrospective

TL;DR

This paper reviews the importance of reproducibility and replicability in scientific research, especially in public health, highlighting challenges, current status, and proposing future improvements for reliable scientific progress.

Contribution

It provides a comprehensive retrospective analysis of reproducible research, clarifies its relationship with replicability, and suggests strategies to enhance scientific reliability.

Findings

Reproducibility is often hindered by lack of data and code availability.

Reproducibility and replicability serve different but related scientific goals.

Improving transparency can enhance both reproducibility and replicability.

Abstract

Rapid advances in computing technology over the past few decades have spurred two extraordinary phenomena in science: large-scale and high-throughput data collection coupled with the creation and implementation of complex statistical algorithms for data analysis. Together, these two phenomena have brought about tremendous advances in scientific discovery but have also raised two serious concerns, one relatively new and one quite familiar. The complexity of modern data analyses raises questions about the reproducibility of the analyses, meaning the ability of independent analysts to re-create the results claimed by the original authors using the original data and analysis techniques. While seemingly a straightforward concept, reproducibility of analyses is typically thwarted by the lack of availability of the data and computer code that were used in the analyses. A much more general concern is the replicability of scientific findings, which concerns the frequency with which scientific claims are confirmed by completely independent investigations. While the concepts of reproduciblity and replicability are related, it is worth noting that they are focused on quite different goals and address different aspects of scientific progress. In this review, we will discuss the origins of reproducible research, characterize the current status of reproduciblity in public health research, and connect reproduciblity to current concerns about replicability of scientific findings. Finally, we describe a path forward for improving both the reproducibility and replicability of public health research in the future.