Information density, structure and entropy in equilibrium and non-equilibrium systems
Mengjie Zu, Arunkumar Bupathy, Daan Frenkel, Srikanth Sastry

TL;DR
This paper compares various entropy measures in equilibrium and non-equilibrium systems, proposing a new bit-wise method and analyzing their effectiveness in detecting ordering phenomena and their quantitative differences.
Contribution
It introduces a novel bit-wise entropy measurement method for off-lattice systems and evaluates its consistency with other entropy estimates in non-equilibrium contexts.
Findings
Different entropy measures often yield only qualitatively similar results.
Entropy estimates based on data compression differ quantitatively from thermodynamic entropy.
No single structure-based entropy measure currently has universal validity for all systems.
Abstract
During a spontaneous change, a macroscopic physical system will evolve towards a macro-state with more realizations. This observation is at the basis of the Statistical Mechanical version of the Second Law of Thermodynamics, and it provides an interpretation of entropy in terms of probabilities. However, we cannot rely on the statistical-mechanical expressions for entropy in systems that are far from equilibrium. In this paper, we compare various extensions of the definition of entropy, which have been proposed for non-equilibrium systems. It has recently been proposed that measures of information density may serve to quantify entropy in both equilibrium and nonequilibrium systems. We propose a new "bit-wise" method to measure the information density for off lattice systems. This method does not rely on coarse-graining of the particle coordinates. We then compare different estimates of…
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