Perils of Embedding for Sampling Problems
Jeffrey Marshall, Andrea Di Gioacchino, Eleanor G. Rieffel

TL;DR
This paper investigates how graph minor embedding in quantum annealers affects the accuracy of sampling from classical and quantum systems, revealing exponential suppression of correct samples and proposing a resampling method to mitigate bias.
Contribution
It highlights the severe impact of embedding on sampling accuracy and introduces a novel resampling technique that outperforms existing methods in preserving distribution properties.
Findings
Embedding causes exponential suppression of logical subspace samples.
Post-processing biases sampling distributions.
Resampling technique significantly improves sampling accuracy.
Abstract
Advances in techniques for thermal sampling in classical and quantum systems would deepen understanding of the underlying physics. Unfortunately, one often has to rely solely on inexact numerical simulation, due to the intractability of computing the partition function in many systems of interest. Emerging hardware, such as quantum annealers, provide novel tools for such investigations, but it is well known that studying general, non-native systems on such devices requires graph minor embedding, at the expense of introducing additional variables. The effect of embedding for sampling is more pronounced than for optimization; for optimization one is just concerned with the ground state physics, whereas for sampling one needs to consider states at all energies. We argue that as the system size or the embedding size grows, the chance of a sample being in the subspace of interest - the…
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