Function Preserving Projection for Scalable Exploration of High-Dimensional Data
Shusen Liu, Rushil Anirudh, Jayaraman J. Thiagarajan, Peer-Timo, Bremer

TL;DR
Function Preserving Projection (FPP) is a scalable linear method that reveals interpretable and non-linear relationships in high-dimensional data, enabling new insights in large-scale datasets.
Contribution
FPP introduces a novel linear projection technique that preserves interpretability while capturing non-linear relationships and scaling to millions of samples.
Findings
FPP produces human-interpretable 2D embeddings.
FPP captures non-linear relationships between data and responses.
FPP scales efficiently to large datasets with millions of samples.
Abstract
We present function preserving projections (FPP), a scalable linear projection technique for discovering interpretable relationships in high-dimensional data. Conventional dimension reduction methods aim to maximally preserve the global and/or local geometric structure of a dataset. However, in practice one is often more interested in determining how one or multiple user-selected response function(s) can be explained by the data. To intuitively connect the responses to the data, FPP constructs 2D linear embeddings optimized to reveal interpretable yet potentially non-linear patterns of the response functions. More specifically, FPP is designed to (i) produce human-interpretable embeddings; (ii) capture non-linear relationships; (iii) allow the simultaneous use of multiple response functions; and (iv) scale to millions of samples. Using FPP on real-world datasets, one can obtain…
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Taxonomy
TopicsMachine Learning and Data Classification · Cell Image Analysis Techniques · Data Visualization and Analytics
