# Fully-Asynchronous Fully-Implicit Variable-Order Variable-Timestep   Simulation of Neural Networks

**Authors:** Bruno Magalh\~aes, Michael Hines, Thomas Sterling, Felix Schuermann

arXiv: 1907.00670 · 2020-06-05

## TL;DR

This paper presents a fully-asynchronous, adaptive-step simulation method for neural networks that improves accuracy and efficiency by removing synchronization barriers, enabling better handling of multiscale dynamics and stiff systems.

## Contribution

It introduces a novel distributed asynchronous execution model for neural simulations that allows variable timesteps and reduces synchronization overhead.

## Key findings

- Reduced number of interpolation steps compared to state-of-the-art methods
- Higher numerical accuracy in simulations
- Lower time to solution on high-performance computing systems

## Abstract

State-of-the-art simulations of detailed neural models follow the Bulk Synchronous Parallel execution model. Execution is divided in equidistant communication intervals, equivalent to the shortest synaptic delay in the network. Neurons stepping is performed independently, with collective communication guiding synchronization and exchange of synaptic events.   The interpolation step size is fixed and chosen based on some prior knowledge of the fastest possible dynamics in the system. However, simulations driven by stiff dynamics or a wide range of time scales - such as multiscale simulations of neural networks - struggle with fixed step interpolation methods, yielding excessive computation of intervals of quasi-constant activity, inaccurate interpolation of periods of high volatility solution, and being incapable of handling unknown or distinct time constants. A common alternative is the usage of adaptive stepping methods, however they have been deemed inefficient in parallel executions due to computational load imbalance at the synchronization barriers that characterize the BSP execution model.   We introduce a distributed fully-asynchronous execution model that removes global synchronization, allowing for longer variable timestep interpolations. Asynchronicity is provided by active point-to-point communication notifying neurons' time advancement to synaptic connectivities. Time stepping is driven by scheduled neuron advancements based on synaptic delays across neurons, yielding an "exhaustive yet not speculative" adaptive-step execution. Execution benchmarks on 64 Cray XE6 compute nodes demonstrate a reduced number of interpolation steps, higher numerical accuracy and lower time to solution, compared to state-of-the-art methods. Efficiency is shown to be activity-dependent, with scaling of the algorithm demonstrated on a simulation of a laboratory experiment.

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/1907.00670/full.md

## References

27 references — full list in the complete paper: https://tomesphere.com/paper/1907.00670/full.md

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Source: https://tomesphere.com/paper/1907.00670