Scrubbing Sensitive PHI Data from Medical Records made Easy by SpaCy -- A Scalable Model Implementation Comparisons
Rashmi Jain, Dinah Samuel Anand, Vijayalakshmi Janakiraman

TL;DR
This paper compares various deep learning techniques for de-identifying sensitive PHI data in medical records, highlighting SpaCy's superior performance and efficiency in scalable implementation.
Contribution
The study evaluates multiple models for PHI de-identification and demonstrates that SpaCy offers a highly effective and scalable solution.
Findings
SpaCy outperforms other models in accuracy and speed
Deep learning models vary significantly in scalability
SpaCy's implementation is suitable for large-scale medical data processing
Abstract
De-identification of clinical records is an extremely important process which enables the use of the wealth of information present in them. There are a lot of techniques available for this but none of the method implementation has evaluated the scalability, which is an important benchmark. We evaluated numerous deep learning techniques such as BiLSTM-CNN, IDCNN, CRF, BiLSTM-CRF, SpaCy, etc. on both the performance and efficiency. We propose that the SpaCy model implementation for scrubbing sensitive PHI data from medical records is both well performing and extremely efficient compared to other published models.
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Taxonomy
TopicsBiomedical Text Mining and Ontologies · Topic Modeling · Semantic Web and Ontologies
MethodsConditional Random Field
