# Free log-likelihood as an unbiased metric for coherent diffraction   imaging

**Authors:** Vincent Favre-Nicolin, Steven Leake, Yuriy Chushkin

arXiv: 1904.07056 · 2020-08-27

## TL;DR

This paper introduces a 'free' log-likelihood metric for unbiasedly evaluating coherent diffraction imaging reconstructions, enabling validation across diverse samples and large datasets without prior support knowledge.

## Contribution

The authors propose a novel 'free' log-likelihood indicator and eigen-decomposition analysis for unbiased solution validation in CDI, applicable to various materials and experimental conditions.

## Key findings

- The method provides an unbiased validation metric for CDI reconstructions.
- It is effective on experimental data from both test patterns and biological samples.
- Applicable to high-throughput datasets from advanced synchrotron and XFEL sources.

## Abstract

Coherent Diffraction Imaging (CDI), a technique where an object is reconstructed from a single (2D or 3D) diffraction pattern, recovers the lost diffraction phases without a priori knowledge of the extent (support) of the object, which prevents an unambiguous metric evaluation of solutions. We propose to use a 'free' log-likelihood indicator, where a small percentage of points are masked from the reconstruction algorithms, as an unbiased metric to evaluate the validity of proposed solutions, independent of the sample studied. We also show how a set of solutions can be analysed through an eigen-decomposition to yield a better estimate of the real object. Example analysis on experimental data is presented both for a test pattern dataset, and the diffraction pattern from a live cyanobacteria cell. The method allows the validation of reconstructions on a wide range of materials (hard condensed, biological,..), and should be particularly relevant for 4th generation synchrotrons and X-ray free electron lasers, where large, high-throughput datasets require a method for unsupervised data evaluation.

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/1904.07056/full.md

## References

50 references — full list in the complete paper: https://tomesphere.com/paper/1904.07056/full.md

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Source: https://tomesphere.com/paper/1904.07056