The Generic Holdout: Preventing False-Discoveries in Adaptive Data Science

TL;DR

The paper introduces the Generic Holdout, a simple yet effective framework that enables scientists to perform adaptive data analysis with exponentially more queries while preventing false discoveries, by partitioning data and limiting information exposure.

Contribution

It proposes a new data analysis framework that significantly improves the number of valid adaptive queries, addressing false discoveries in scientific research.

Findings

Exponential increase in valid adaptive queries compared to previous methods.

Simple data partitioning and limited exposure strategy effectively prevent false discoveries.

Framework applicable to real-world scientific hypothesis testing.

Abstract

Adaptive data analysis has posed a challenge to science due to its ability to generate false hypotheses on moderately large data sets. In general, with non-adaptive data analyses (where queries to the data are generated without being influenced by answers to previous queries) a data set containing $n$ samples may support exponentially many queries in $n$. This number reduces to linearly many under naive adaptive data analysis, and even sophisticated remedies such as the Reusable Holdout (Dwork et. al 2015) only allow quadratically many queries in $n$. In this work, we propose a new framework for adaptive science which exponentially improves on this number of queries under a restricted yet scientifically relevant setting, where the goal of the scientist is to find a single (or a few) true hypotheses about the universe based on the samples. Such a setting may describe the search for predictive factors of some disease based on medical data, where the analyst may wish to try a number of predictive models until a satisfactory one is found. Our solution, the Generic Holdout, involves two simple ingredients: (1) a partitioning of the data into a exploration set and a holdout set and (2) a limited exposure strategy for the holdout set. An analyst is free to use the exploration set arbitrarily, but when testing hypotheses against the holdout set, the analyst only learns the answer to the question: "Is the given hypothesis true (empirically) on the holdout set?" -- and no more information, such as "how well" the hypothesis fits the holdout set. The resulting scheme is immediate to analyze, but despite its simplicity we do not believe our method is obvious, as evidenced by the many violations in practice. Our proposal can be seen as an alternative to pre-registration, and allows researchers to get the benefits of adaptive data analysis without the problems of adaptivity.