A Modality-Adaptive Method for Segmenting Brain Tumors and Organs-at-Risk in Radiation Therapy Planning
Mikael Agn (1), Per Munck af Rosensch\"old (2), Oula Puonti (3),, Michael J. Lundemann (4), Laura Mancini (5, 6), Anastasia Papadaki (5 and, 6), Steffi Thust (5, 6), John Ashburner (7), Ian Law (8), Koen Van Leemput, (1, 9) ((1) Department of Applied Mathematics

TL;DR
This paper introduces a novel modality-adaptive segmentation method that accurately delineates brain tumors and organs-at-risk in radiation therapy planning, adaptable to diverse imaging data and comparable to current state-of-the-art techniques.
Contribution
The proposed method combines a contrast-adaptive generative model with a new spatial regularization approach using convolutional restricted Boltzmann machines, enhancing adaptability and accuracy.
Findings
Adaptable to different image acquisition protocols
Tumor segmentation accuracy comparable to state-of-the-art
Effectively captures organs-at-risk for planning
Abstract
In this paper we present a method for simultaneously segmenting brain tumors and an extensive set of organs-at-risk for radiation therapy planning of glioblastomas. The method combines a contrast-adaptive generative model for whole-brain segmentation with a new spatial regularization model of tumor shape using convolutional restricted Boltzmann machines. We demonstrate experimentally that the method is able to adapt to image acquisitions that differ substantially from any available training data, ensuring its applicability across treatment sites; that its tumor segmentation accuracy is comparable to that of the current state of the art; and that it captures most organs-at-risk sufficiently well for radiation therapy planning purposes. The proposed method may be a valuable step towards automating the delineation of brain tumors and organs-at-risk in glioblastoma patients undergoing…
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