Automated Phenotyping of Epicuticular Waxes of Grapevine Berries Using Light Separation and Convolutional Neural Networks

TL;DR

This paper introduces a rapid, objective, and sensor-based method using light separation and convolutional neural networks to phenotypically assess grapevine berry waxes, correlating well with skin impedance and aiding breeding for disease resistance.

Contribution

It presents a novel, fast, and non-invasive phenotyping technique combining light separation and CNNs for assessing berry bloom in grapevines, improving accuracy and efficiency.

Findings

Achieved up to 97.3% accuracy in phenotyping

Correlated wax distribution with skin impedance (r=0.76)

Enabled large-scale screening for breeding programs

Abstract

In viticulture the epicuticular wax as the outer layer of the berry skin is known as trait which is correlated to resilience towards Botrytis bunch rot. Traditionally this trait is classified using the OIV descriptor 227 (berry bloom) in a time consuming way resulting in subjective and error-prone phenotypic data. In the present study an objective, fast and sensor-based approach was developed to monitor berry bloom. From the technical point-of-view, it is known that the measurement of different illumination components conveys important information about observed object surfaces. A Mobile Light-Separation-Lab is proposed in order to capture illumination-separated images of grapevine berries for phenotyping the distribution of epicuticular waxes (berry bloom). For image analysis, an efficient convolutional neural network approach is used to derive the uniformity and intactness of waxes on berries. Method validation over six grapevine cultivars shows accuracies up to $97.3$%. In addition, electrical impedance of the cuticle and its epicuticular waxes (described as an indicator for the thickness of berry skin and its permeability) was correlated to the detected proportion of waxes with $r=0.76$. This novel, fast and non-invasive phenotyping approach facilitates enlarged screenings within grapevine breeding material and genetic repositories regarding berry bloom characteristics and its impact on resilience towards Botrytis bunch rot.