Partial geodesics on symmetric groups endowed with breakpoint distance
Poly H. da Silva, Arash Jamshidpey, David Sankoff

TL;DR
This paper investigates the structure of partial geodesics in the symmetric group with breakpoint distance, deriving convergence results for adjacency types and providing bounds on permutations with non-trivial geodesic points, supporting a conjecture about breakpoint medians.
Contribution
It introduces a convergence theorem for adjacency types in random permutations and bounds the number of permutations with non-trivial geodesic points, advancing understanding of geodesic structures in breakpoint metrics.
Findings
Convergence of adjacency type proportions in large random permutations.
Upper bounds on permutations with non-trivial geodesic points.
Support for the conjecture that random permutations lack distant breakpoint medians.
Abstract
The notion of partial geodesic was introduced by Jamshidpey et al. in "Sets of medians in the non-geodesic pseudometric space of unsigned genomes with breakpoints", 2014. In this paper, we study the density of points on non-trivial partial geodesics between two permutations and chosen uniformly and independently at random from the symmetric group , where is endowed with the breakpoint distance. For a permutation , any unordered pair , for , is called an adjacency of . The set of all adjacencies of is denoted by . Denote by the identity permutation, and let be an arbitrary subset of . We classify the set of all adjacencies of a permutation into four types, with respect to . Then for a permutation…
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Taxonomy
TopicsGenome Rearrangement Algorithms · graph theory and CDMA systems · Geometric and Algebraic Topology
